STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW29946.1Formate dehydrogenase. (195 aa)    
Predicted Functional Partners:
GAW28539.1
NADH dehydrogenase.
  
 0.997
GAW28780.1
NADH dehydrogenase.
  
 0.997
GAW29251.1
NADH-quinone oxidoreductase subunit 1.
  
 0.994
GAW28172.1
Hydrogenase.
  
 0.977
GAW29179.1
Formate dehydrogenase-N subunit alpha.
 
     0.976
GAW28542.1
Formate dehydrogenase subunit alpha.
 
     0.938
GAW29134.1
Iron-sulfur protein.
 
 0.923
GAW29178.1
(4Fe-4S)-binding protein.
  
 
  0.920
GAW29947.1
(4Fe-4S)-binding protein.
  
 
  0.916
GAW28602.1
Ferredoxin-type protein NapG.
  
 0.912
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.