STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW30061.1tryptophan--tRNA ligase. (328 aa)    
Predicted Functional Partners:
GAW30063.1
Polynucleotide adenylyltransferase.
 
    0.845
GAW30060.1
Segregation/condensation protein A.
  
    0.818
GAW30059.1
SMC-Scp complex subunit ScpB.
       0.798
GAW30062.1
Peptidase M50.
      0.789
GAW29269.1
phenylalanine--tRNA ligase subunit beta.
  
  
 0.764
GAW28147.1
seryl-tRNA synthetase.
  
 
 0.741
GAW29160.1
Phosphoribosylformylglycinamidine synthase.
  
    0.739
GAW28033.1
leucine--tRNA ligase.
 
 
 0.723
GAW28988.1
methionine--tRNA ligase.
  
 
 0.712
GAW27500.1
glutamate--tRNA ligase.
 
 
 0.708
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.