STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW30123.1Trehalose-6-phosphate synthase. (470 aa)    
Predicted Functional Partners:
GAW30122.1
Trehalose-phosphatase.
 
 0.999
GAW29441.1
Beta-phosphoglucomutase.
    
 0.942
GAW30125.1
Glycosyl transferase.
    
 0.853
GAW30124.1
Glycogen debranching protein.
 
  
  0.804
GAW28001.1
UTP--glucose-1-phosphate uridylyltransferase.
    
 0.795
GAW29793.1
Oligosaccharide amylase.
 
  
 0.793
GAW29465.1
Hypothetical protein.
     
 0.679
GAW29784.1
Hydrolase Cof.
 
  
 0.670
GAW29438.1
Alpha-glucosidase.
  
 
 0.657
GAW27631.1
Cyclomaltodextrin glucanotransferase.
  
 
 0.609
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.