STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW30135.1Hypothetical protein. (240 aa)    
Predicted Functional Partners:
GAW30134.1
Hypothetical protein.
 
  
 0.823
GAW28386.1
Thioredoxin-disulfide reductase.
 
  
 0.652
GAW29067.1
Zinc/iron permease.
   
    0.634
GAW27729.1
ATPase.
     
 0.576
GAW30136.1
Glutamate 2,3-aminomutase.
       0.546
GAW29970.1
Cytochrome c biogenesis protein.
 
  
 0.516
GAW29975.1
uroporphyrin-III C-methyltransferase.
  
    0.500
GAW28943.1
Preprotein translocase subunit TatB.
   
    0.489
GAW29655.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.486
GAW29971.1
C-type cytochrome biogenesis protein CcsB.
 
  
 0.486
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.