STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW30202.1tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB. (431 aa)    
Predicted Functional Partners:
GAW30204.1
Ribosomal protein L11 methyltransferase.
  
    0.935
GAW30203.1
16S rRNA methyltransferase.
  
  
 0.895
GAW30201.1
Histidine triad (HIT) protein.
 
   0.753
GAW30109.1
16S rRNA (cytosine(967)-C(5))-methyltransferase.
  
  
 0.591
GAW30108.1
23S rRNA (adenine(2503)-C(2))-methyltransferase.
 
  
 0.550
GAW28651.1
Ribonuclease PH.
    
   0.549
GAW28083.1
Hypothetical protein.
  
  
 0.498
GAW28059.1
Molecular chaperone DnaJ.
  
 
 0.479
GAW28054.1
Coproporphyrinogen III oxidase.
 
   
 0.467
GAW30200.1
Hypothetical protein.
  
    0.439
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.