STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAW30203.116S rRNA methyltransferase. (253 aa)    
Predicted Functional Partners:
GAW30204.1
Ribosomal protein L11 methyltransferase.
  
 0.972
GAW30202.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB.
  
  
 0.895
GAW30201.1
Histidine triad (HIT) protein.
      0.841
GAW28059.1
Molecular chaperone DnaJ.
  
   0.573
GAW30109.1
16S rRNA (cytosine(967)-C(5))-methyltransferase.
 
  
 0.528
GAW29879.1
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6)) -dimethyltransferase.
 
  
 0.501
GAW30200.1
Hypothetical protein.
     
 0.476
GAW30219.1
tRNA modification GTPase.
  
   
 0.424
GAW28024.1
RNA-binding protein.
 
  
 0.413
GAW28990.1
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
 
   
 0.410
Your Current Organism:
Carboxydocella sp. ULO1
NCBI taxonomy Id: 1926599
Other names: C. sp. ULO1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.