STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLL29255.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (969 aa)    
Predicted Functional Partners:
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
     
 0.653
OLL29246.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.647
OLL31300.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
OLL31561.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.580
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
     
 0.566
OLL32124.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.555
OLL33126.1
Fused uroporphyrinogen-III synthase HemD/membrane protein HemX; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.534
moaA
Cyclic pyranopterin phosphate synthase MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
 
  0.533
OLL29252.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.527
OLL28418.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
Your Current Organism:
Burkholderia sp. SRSW22016
NCBI taxonomy Id: 1926878
Other names: B. sp. SRS-W-2-2016, Burkholderia sp. SRS-W-2-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.