STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OON41305.1GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (392 aa)    
Predicted Functional Partners:
OON39601.1
Two-component sensor histidine kinase BarA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.965
OON39219.1
Aerobic respiration two-component sensor histidine kinase ArcB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
OON38896.1
Sensor histidine kinase BvgS; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.941
OON40731.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.925
OON41695.1
GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.923
OON34697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.922
OON39687.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.907
OON41331.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.899
OON41196.1
Cyclic di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.853
OON38533.1
Biofilm formation regulator HmsP; HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.836
Your Current Organism:
Izhakiella australiensis
NCBI taxonomy Id: 1926881
Other names: DSM 105030, I. australiensis, Izhakiella australiensis Ji et al. 2017, Izhakiella sp. D4N98, LMG 30066, LMG:30066, strain D4N98
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.