STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcpPyroglutamyl-peptidase I; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family. (215 aa)    
Predicted Functional Partners:
OON40142.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.811
OON40139.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.803
OON40140.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.798
OON38927.1
Endonuclease VIII; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family.
       0.780
OON38929.1
Nif3-like dinuclear metal center protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.583
OON38930.1
Deoxyribodipyrimidine photo-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.
       0.576
OON38931.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.573
Your Current Organism:
Izhakiella australiensis
NCBI taxonomy Id: 1926881
Other names: DSM 105030, I. australiensis, Izhakiella australiensis Ji et al. 2017, Izhakiella sp. D4N98, LMG 30066, LMG:30066, strain D4N98
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