STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA26610.1Flagellar biosynthesis protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)    
Predicted Functional Partners:
ORA28642.1
Pilus assembly protein TadC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.884
ORA28643.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.865
ORA28640.1
Pilus biosynthesis protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.849
ORA22524.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.791
ORA26611.1
FmdB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.773
ORA28645.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.724
ORA28644.1
Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.713
mscL
SAM-dependent methyltransferase; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.
       0.660
ORA34655.1
tRNA adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
ORA37828.1
Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
Your Current Organism:
Mycobacterium aquaticum
NCBI taxonomy Id: 1927124
Other names: CIP 111198, DSM 104277, M. aquaticum, Mycobacterium aquaticum Shahraki et al. 2017, Mycobacterium sp. RW6, strain RW6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.