STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4663_00135Unannotated protein. (449 aa)    
Predicted Functional Partners:
E4663_17695
Unannotated protein.
  
     0.744
E4663_15340
Unannotated protein.
  
     0.646
E4663_12200
Unannotated protein.
  
     0.567
E4663_09725
Unannotated protein.
  
     0.519
E4663_13405
Unannotated protein.
  
     0.513
E4663_13450
Unannotated protein.
  
     0.502
E4663_01985
Unannotated protein.
  
     0.496
E4663_15145
Unannotated protein.
  
     0.491
E4663_02145
Unannotated protein.
  
     0.481
E4663_00815
Unannotated protein; Belongs to the TelA family.
  
     0.471
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.