STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4663_00740Unannotated protein. (181 aa)    
Predicted Functional Partners:
E4663_00725
Unannotated protein.
       0.773
E4663_14870
Unannotated protein.
  
     0.632
E4663_05210
Unannotated protein.
 
      0.629
E4663_08990
Unannotated protein.
  
 
 0.622
GCA_900166575_00425
Unannotated protein.
       0.565
E4663_04970
Unannotated protein; Belongs to the FPP/GGPP synthase family.
  
 
 0.555
E4663_01600
Unannotated protein.
  
     0.520
E4663_16545
Unannotated protein.
   
  
 0.505
E4663_15910
Unannotated protein.
   
  
 0.505
E4663_07220
Unannotated protein; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
 
 0.489
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.