STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4663_01795Unannotated protein. (534 aa)    
Predicted Functional Partners:
gltB
Unannotated protein.
    
 0.952
aroF
Unannotated protein.
    
 0.813
E4663_10325
Unannotated protein.
  
 
 0.732
E4663_18140
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.704
panC
Unannotated protein; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.689
hisI
Unannotated protein; In the N-terminal section; belongs to the PRA-CH family.
    
 0.677
E4663_01785
Unannotated protein.
    
  0.639
E4663_06480
Unannotated protein.
  
  
  0.630
E4663_13075
Unannotated protein.
 
 
 0.613
mce
Unannotated protein.
   
 
  0.606
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.