STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4663_04730Unannotated protein. (71 aa)    
Predicted Functional Partners:
E4663_04735
Unannotated protein.
  
    0.801
E4663_04725
Unannotated protein.
       0.596
E4663_01390
Unannotated protein; Belongs to the LTA synthase family.
 
     0.549
E4663_04720
Unannotated protein.
 
     0.542
E4663_14780
Unannotated protein.
  
     0.515
E4663_04740
Unannotated protein; Belongs to the LTA synthase family.
 
     0.512
E4663_11875
Unannotated protein; Belongs to the LTA synthase family.
 
     0.493
E4663_06255
Unannotated protein; Belongs to the UPF0346 family.
  
     0.451
rpsK
Unannotated protein; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
    0.443
E4663_03325
Unannotated protein.
  
     0.433
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.