STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4663_07655Unannotated protein. (245 aa)    
Predicted Functional Partners:
GCA_900166575_00495
Unannotated protein.
 
     0.643
E4663_07990
Unannotated protein.
  
    0.575
E4663_08265
Unannotated protein.
  
     0.501
E4663_00480
Unannotated protein.
  
     0.491
E4663_01515
Unannotated protein.
  
     0.476
E4663_02105
Unannotated protein.
    
 0.442
tenA
Unannotated protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
   
 
  0.438
E4663_18140
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
  0.425
E4663_01570
Unannotated protein.
  
     0.419
thiL
Unannotated protein; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
     
 0.413
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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