Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E4663_01335 | E4663_01875 | GCA_900166575_00556 | GCA_900166575_00672 | Unannotated protein. | Unannotated protein. | 0.420 |
E4663_01335 | cobA | GCA_900166575_00556 | GCA_900166575_00553 | Unannotated protein. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.986 |
E4663_01335 | hemB | GCA_900166575_00556 | GCA_900166575_01093 | Unannotated protein. | Unannotated protein; Belongs to the ALAD family. | 0.839 |
E4663_01335 | hemC | GCA_900166575_00556 | GCA_900166575_01091 | Unannotated protein. | Unannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.984 |
E4663_01335 | hemE | GCA_900166575_00556 | GCA_900166575_02366 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.938 |
E4663_01335 | hemY | GCA_900166575_00556 | GCA_900166575_02364 | Unannotated protein. | Unannotated protein; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.488 |
E4663_01875 | E4663_01335 | GCA_900166575_00672 | GCA_900166575_00556 | Unannotated protein. | Unannotated protein. | 0.420 |
E4663_01875 | E4663_03830 | GCA_900166575_00672 | GCA_900166575_01092 | Unannotated protein. | Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.420 |
E4663_01875 | cobA | GCA_900166575_00672 | GCA_900166575_00553 | Unannotated protein. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.533 |
E4663_01875 | gltB | GCA_900166575_00672 | GCA_900166575_02779 | Unannotated protein. | Unannotated protein. | 0.882 |
E4663_01875 | hemC | GCA_900166575_00672 | GCA_900166575_01091 | Unannotated protein. | Unannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.580 |
E4663_01875 | hemE | GCA_900166575_00672 | GCA_900166575_02366 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.655 |
E4663_03830 | E4663_01875 | GCA_900166575_01092 | GCA_900166575_00672 | Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Unannotated protein. | 0.420 |
E4663_03830 | cobA | GCA_900166575_01092 | GCA_900166575_00553 | Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Unannotated protein; Belongs to the precorrin methyltransferase family. | 0.993 |
E4663_03830 | hemB | GCA_900166575_01092 | GCA_900166575_01093 | Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Unannotated protein; Belongs to the ALAD family. | 0.990 |
E4663_03830 | hemC | GCA_900166575_01092 | GCA_900166575_01091 | Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Unannotated protein; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.999 |
E4663_03830 | hemE | GCA_900166575_01092 | GCA_900166575_02366 | Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Unannotated protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.846 |
E4663_03830 | hemY | GCA_900166575_01092 | GCA_900166575_02364 | Unannotated protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | Unannotated protein; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. | 0.574 |
E4663_04400 | gltB | GCA_900166575_01208 | GCA_900166575_02779 | Unannotated protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Unannotated protein. | 0.495 |
E4663_04400 | hemE | GCA_900166575_01208 | GCA_900166575_02366 | Unannotated protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. | Unannotated protein; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.677 |
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