STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4663_09945Unannotated protein. (143 aa)    
Predicted Functional Partners:
hemH
Unannotated protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.950
E4663_12895
Unannotated protein.
     
 0.774
rsbW
Unannotated protein; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).
   
  
 0.759
sigB
Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
   
  
 0.728
E4663_16765
Unannotated protein; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
  
 0.667
E4663_17755
Unannotated protein.
   
    0.666
E4663_18955
Unannotated protein.
   
    0.632
sigF
Unannotated protein; Belongs to the sigma-70 factor family.
   
  
 0.626
E4663_16550
Unannotated protein.
   
  
 0.613
E4663_13720
Unannotated protein.
  
  
 0.608
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.