STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E4663_17495Unannotated protein. (289 aa)    
Predicted Functional Partners:
gltB
Unannotated protein.
     
 0.861
E4663_03130
Unannotated protein.
     
 0.717
GCA_900166575_00342
Unannotated protein.
  
 
  0.641
pfkB
Unannotated protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
   
 
  0.594
E4663_17500
Unannotated protein.
       0.588
fabD
Unannotated protein.
 
 0.569
E4663_17490
Unannotated protein.
       0.548
pyk
Unannotated protein; Belongs to the pyruvate kinase family.
   
 0.546
E4663_11130
Unannotated protein.
 
 
 0.540
E4663_13140
Unannotated protein.
   
 0.536
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.