STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166575_02703Unannotated protein. (217 aa)    
Predicted Functional Partners:
GCA_900166575_02700
Unannotated protein.
 
 
 0.986
E4663_12670
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.931
aceA
Unannotated protein.
     
 0.927
E4663_03130
Unannotated protein.
  
 
 0.906
E4663_14010
Unannotated protein.
   
 
 0.906
E4663_14005
Unannotated protein.
     
 0.893
pyk
Unannotated protein; Belongs to the pyruvate kinase family.
    
 0.880
pgi
Unannotated protein; Belongs to the GPI family.
  
 
 0.856
E4663_03515
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.839
gap
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.839
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.