STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166575_03194Unannotated protein. (1060 aa)    
Predicted Functional Partners:
GCA_900166575_03192
Unannotated protein.
 
  
 0.931
GCA_900166575_03191
Unannotated protein.
  
  
 0.912
GCA_900166575_03185
Unannotated protein.
 
   
 0.867
GCA_900166575_03195
Unannotated protein.
 
   
 0.829
GCA_900166575_03193
Unannotated protein.
 
    
0.742
GCA_900166575_03188
Unannotated protein.
 
   
 0.706
GCA_900166575_03196
Unannotated protein.
       0.689
GCA_900166575_03190
Unannotated protein.
 
     0.535
GCA_900166575_03187
Unannotated protein.
 
    0.509
GCA_900166575_03186
Unannotated protein.
 
     0.482
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.