STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166575_03205Unannotated protein. (253 aa)    
Predicted Functional Partners:
GCA_900166575_03204
Unannotated protein.
 
    0.925
GCA_900166575_03203
Unannotated protein.
 
    0.893
GCA_900166575_03200
Unannotated protein.
 
    0.839
GCA_900166575_03201
Unannotated protein.
 
    0.819
GCA_900166575_03198
Unannotated protein.
    0.807
GCA_900166575_00383
Unannotated protein.
    0.759
GCA_900166575_00216
Unannotated protein.
    0.750
GCA_900166575_00493
Unannotated protein.
    0.750
GCA_900166575_03206
Unannotated protein.
 
    
0.684
GCA_900166575_03202
Unannotated protein.
 
    0.646
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.