Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E4663_05015 | E4663_16130 | GCA_900166575_01403 | GCA_900166575_03148 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.760 |
E4663_05015 | aroF | GCA_900166575_01403 | GCA_900166575_00970 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.675 |
E4663_05015 | asd | GCA_900166575_01403 | GCA_900166575_01780 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.997 |
E4663_05015 | dapA | GCA_900166575_01403 | GCA_900166575_01778 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.817 |
E4663_05015 | dapA-2 | GCA_900166575_01403 | GCA_900166575_03301 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.810 |
E4663_05015 | dapB | GCA_900166575_01403 | GCA_900166575_01609 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.784 |
E4663_05015 | dapD | GCA_900166575_01403 | GCA_900166575_02114 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.750 |
E4663_05015 | dapF | GCA_900166575_01403 | GCA_900166575_02200 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.784 |
E4663_05015 | lysA | GCA_900166575_01403 | GCA_900166575_01532 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.816 |
E4663_16130 | E4663_05015 | GCA_900166575_03148 | GCA_900166575_01403 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.760 |
E4663_16130 | asd | GCA_900166575_03148 | GCA_900166575_01780 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.988 |
E4663_16130 | dapA | GCA_900166575_03148 | GCA_900166575_01778 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.955 |
E4663_16130 | dapA-2 | GCA_900166575_03148 | GCA_900166575_03301 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.956 |
E4663_16130 | dapB | GCA_900166575_03148 | GCA_900166575_01609 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.563 |
E4663_16130 | dapG | GCA_900166575_03148 | GCA_900166575_01779 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.841 |
E4663_16130 | lysA | GCA_900166575_03148 | GCA_900166575_01532 | Unannotated protein. | Unannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.627 |
aroF | E4663_05015 | GCA_900166575_00970 | GCA_900166575_01403 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.675 |
aroF | dapA | GCA_900166575_00970 | GCA_900166575_01778 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.676 |
aroF | dapA-2 | GCA_900166575_00970 | GCA_900166575_03301 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.676 |
aroF | dapG | GCA_900166575_00970 | GCA_900166575_01779 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.675 |
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