STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166575_03439Unannotated protein. (506 aa)    
Predicted Functional Partners:
GCA_900166575_03438
Unannotated protein.
 
     0.852
GCA_900166575_02664
Unannotated protein.
     
 0.842
coxB
Unannotated protein; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
     
 0.826
GCA_900166575_03440
Unannotated protein.
 
   
 0.815
GCA_900166575_03437
Unannotated protein.
  
 
 0.799
GCA_900166575_03443
Unannotated protein.
 
 
 0.721
GCA_900166575_00860
Unannotated protein.
  
 
 0.704
guaA
Unannotated protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.673
GCA_900166575_03446
Unannotated protein.
  
 
 0.670
tatC
Unannotated protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.558
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.