STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepAUnannotated protein; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (485 aa)    
Predicted Functional Partners:
glyA
Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.594
E4663_12620
Unannotated protein.
       0.580
cysK
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.571
cysK-2
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.571
E4663_06085
Unannotated protein.
   
  0.562
E4663_17665
Unannotated protein.
    
  0.556
E4663_17660
Unannotated protein.
    
  0.556
E4663_07990
Unannotated protein.
     
 0.553
E4663_12575
Unannotated protein.
  
 
  0.527
gcvT
Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
  0.526
Your Current Organism:
Halobacillus salinus
NCBI taxonomy Id: 192814
Other names: H. salinus, Halobacillus salinus Yoon et al. 2003, JCM 11546, KCCM 41590, strain HSL-3
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.