Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI63092.1 | SHI69225.1 | SAMN04488513_101838 | SAMN04488513_1011009 | Exonuclease III. | Hypothetical protein. | 0.549 |
SHI63092.1 | SHJ67174.1 | SAMN04488513_101838 | SAMN04488513_10755 | Exonuclease III. | Gliding motility-associated C-terminal domain-containing protein. | 0.771 |
SHI63092.1 | SHJ87275.1 | SAMN04488513_101838 | SAMN04488513_11113 | Exonuclease III. | Hypothetical protein. | 0.757 |
SHI69225.1 | SHI63092.1 | SAMN04488513_1011009 | SAMN04488513_101838 | Hypothetical protein. | Exonuclease III. | 0.549 |
SHI69225.1 | SHI69265.1 | SAMN04488513_1011009 | SAMN04488513_1011010 | Hypothetical protein. | LVIVD repeat-containing protein. | 0.543 |
SHI69225.1 | SHJ00069.1 | SAMN04488513_1011009 | SAMN04488513_102520 | Hypothetical protein. | Rubredoxin. | 0.539 |
SHI69225.1 | SHJ05000.1 | SAMN04488513_1011009 | SAMN04488513_102679 | Hypothetical protein. | Hypothetical protein. | 0.450 |
SHI69225.1 | SHJ05085.1 | SAMN04488513_1011009 | SAMN04488513_102682 | Hypothetical protein. | Hypothetical protein. | 0.462 |
SHI69225.1 | SHJ67174.1 | SAMN04488513_1011009 | SAMN04488513_10755 | Hypothetical protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.551 |
SHI69225.1 | SHJ87275.1 | SAMN04488513_1011009 | SAMN04488513_11113 | Hypothetical protein. | Hypothetical protein. | 0.459 |
SHI69225.1 | SHJ94908.1 | SAMN04488513_1011009 | SAMN04488513_11355 | Hypothetical protein. | Proteolipid membrane potential modulator. | 0.513 |
SHI69225.1 | miaB | SAMN04488513_1011009 | SAMN04488513_1011008 | Hypothetical protein. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.541 |
SHI69225.1 | topA | SAMN04488513_1011009 | SAMN04488513_1011011 | Hypothetical protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.522 |
SHI69265.1 | SHI69225.1 | SAMN04488513_1011010 | SAMN04488513_1011009 | LVIVD repeat-containing protein. | Hypothetical protein. | 0.543 |
SHI69265.1 | miaB | SAMN04488513_1011010 | SAMN04488513_1011008 | LVIVD repeat-containing protein. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.402 |
SHI69265.1 | topA | SAMN04488513_1011010 | SAMN04488513_1011011 | LVIVD repeat-containing protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.556 |
SHJ00069.1 | SHI69225.1 | SAMN04488513_102520 | SAMN04488513_1011009 | Rubredoxin. | Hypothetical protein. | 0.539 |
SHJ05000.1 | SHI69225.1 | SAMN04488513_102679 | SAMN04488513_1011009 | Hypothetical protein. | Hypothetical protein. | 0.450 |
SHJ05085.1 | SHI69225.1 | SAMN04488513_102682 | SAMN04488513_1011009 | Hypothetical protein. | Hypothetical protein. | 0.462 |
SHJ67174.1 | SHI63092.1 | SAMN04488513_10755 | SAMN04488513_101838 | Gliding motility-associated C-terminal domain-containing protein. | Exonuclease III. | 0.771 |
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