Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI37871.1 | SHI37927.1 | SAMN04488513_101120 | SAMN04488513_101122 | Cupin-like domain-containing protein. | Bacteriophage abortive infection AbiH. | 0.403 |
SHI37871.1 | bioB | SAMN04488513_101120 | SAMN04488513_101121 | Cupin-like domain-containing protein. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.600 |
SHI37927.1 | SHI37871.1 | SAMN04488513_101122 | SAMN04488513_101120 | Bacteriophage abortive infection AbiH. | Cupin-like domain-containing protein. | 0.403 |
SHI37927.1 | SHI37960.1 | SAMN04488513_101122 | SAMN04488513_101123 | Bacteriophage abortive infection AbiH. | Flotillin. | 0.486 |
SHI37927.1 | SHI37992.1 | SAMN04488513_101122 | SAMN04488513_101124 | Bacteriophage abortive infection AbiH. | Hypothetical protein. | 0.486 |
SHI37927.1 | bioB | SAMN04488513_101122 | SAMN04488513_101121 | Bacteriophage abortive infection AbiH. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.539 |
SHI37960.1 | SHI37927.1 | SAMN04488513_101123 | SAMN04488513_101122 | Flotillin. | Bacteriophage abortive infection AbiH. | 0.486 |
SHI37960.1 | SHI37992.1 | SAMN04488513_101123 | SAMN04488513_101124 | Flotillin. | Hypothetical protein. | 0.952 |
SHI37992.1 | SHI37927.1 | SAMN04488513_101124 | SAMN04488513_101122 | Hypothetical protein. | Bacteriophage abortive infection AbiH. | 0.486 |
SHI37992.1 | SHI37960.1 | SAMN04488513_101124 | SAMN04488513_101123 | Hypothetical protein. | Flotillin. | 0.952 |
bioB | SHI37871.1 | SAMN04488513_101121 | SAMN04488513_101120 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Cupin-like domain-containing protein. | 0.600 |
bioB | SHI37927.1 | SAMN04488513_101121 | SAMN04488513_101122 | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | Bacteriophage abortive infection AbiH. | 0.539 |