STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI38916.1Protein of unknown function. (613 aa)    
Predicted Functional Partners:
SHI39130.1
Hypothetical protein.
 
     0.856
SHI38949.1
Starch synthase.
       0.820
SHI36797.1
Hypothetical protein.
  
     0.770
SHJ68001.1
Putative MetA-pathway of phenol degradation.
  
     0.764
SHI35814.1
Protein of unknown function.
  
     0.763
SHJ50292.1
Hypothetical protein.
  
     0.762
SHI93237.1
Hypothetical protein.
  
     0.757
SHJ39368.1
Family of unknown function.
  
     0.756
SHJ67421.1
Hypothetical protein.
  
     0.756
SHJ11926.1
Hypothetical protein.
  
     0.752
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.