STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI41066.1Hypothetical protein. (118 aa)    
Predicted Functional Partners:
SHI53075.1
Protein of unknown function.
  
     0.769
SHJ47352.1
Protein involved in gliding motility GldC.
  
     0.752
SHJ39079.1
Hypothetical protein.
  
     0.743
SHI90696.1
Acyl-CoA reductase (LuxC).
  
     0.730
SHJ25402.1
Protein of unknown function.
  
     0.710
SHJ47320.1
Protein involved in gliding motility GldB.
  
     0.708
SHJ70956.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
  
     0.687
SHJ83729.1
Acyltransferase.
  
     0.674
SHJ22447.1
ATP-dependent Clp protease adaptor protein ClpS; Belongs to the ClpS family.
  
     0.667
SHJ73794.1
CBS domain-containing protein.
  
     0.661
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.