STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI46501.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
SHI46530.1
GH3 auxin-responsive promoter.
  
     0.772
SHJ79721.1
Conserved hypothetical protein.
  
     0.636
SHK05162.1
Hypothetical protein.
  
     0.610
SHI98785.1
Predicted PurR-regulated permease PerM.
  
     0.555
SHJ34805.1
Gas vesicle protein.
  
     0.542
SHI46455.1
Protein of unknown function.
 
     0.531
SHI63015.1
Hypothetical protein.
  
     0.467
SHJ28775.1
Haem-NO-binding.
  
     0.455
SHJ34832.1
Hypothetical protein.
  
     0.448
SHJ27612.1
Putative ABC transport system permease protein.
  
     0.441
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.