STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI34029.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (507 aa)    
Predicted Functional Partners:
SHI34061.1
Two component transcriptional regulator, LytTR family.
 
  0.948
SHJ77262.1
Two component transcriptional regulator, LytTR family.
  
  0.840
SHI98440.1
Two component transcriptional regulator, LytTR family.
  
  0.839
SHJ56419.1
Two component transcriptional regulator, LytTR family.
  
  0.823
SHI95650.1
Two component transcriptional regulator, LytTR family.
  
  0.822
SHJ48809.1
Two component transcriptional regulator, LytTR family.
  
  0.822
SHJ76618.1
Two component transcriptional regulator, LytTR family.
  
  0.822
SHJ00628.1
Two component transcriptional regulator, LytTR family.
  
  0.821
SHJ84327.1
Two component transcriptional regulator, LytTR family.
 
  0.821
SHJ36948.1
Two component transcriptional regulator, LytTR family.
 
  0.820
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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