STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI51903.13-oxoacid CoA-transferase subunit A. (233 aa)    
Predicted Functional Partners:
SHI51933.1
3-oxoacid CoA-transferase subunit B.
 0.999
SHI97939.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.927
SHJ25759.1
hydroxymethylglutaryl-CoA lyase.
 
 
 0.906
SHJ73217.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.904
SHI97969.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.901
SHJ11760.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.895
SHJ07686.1
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.882
SHJ59223.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.604
SHJ76949.1
Electron transfer flavoprotein alpha subunit apoprotein.
    
 0.593
SHI50433.1
Alkylhydroperoxidase/carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
  
 
 0.572
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.