STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI56806.1Zinc transporter, ZIP family. (273 aa)    
Predicted Functional Partners:
SHI56777.1
Iron (metal) dependent repressor, DtxR family.
  
  
 0.846
SHI56835.1
Hypothetical protein.
       0.762
SHI56878.1
GAF sensor signal transduction histidine kinase.
       0.762
SHI56743.1
Outer membrane receptor for ferrienterochelin and colicins.
       0.544
SHI44715.1
Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.489
SHJ24761.1
Hypothetical protein.
  
    0.484
SHI56711.1
Lycopene beta-cyclase.
  
    0.438
SHJ37693.1
Amino acid adenylation domain-containing protein.
  
 
 0.401
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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