Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI61285.1 | SHI61391.1 | SAMN04488513_101789 | SAMN04488513_101792 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | Outer membrane lipoprotein carrier protein. | 0.912 |
SHI61285.1 | SHI61460.1 | SAMN04488513_101789 | SAMN04488513_101794 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.969 |
SHI61285.1 | SHI61493.1 | SAMN04488513_101789 | SAMN04488513_101795 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.959 |
SHI61285.1 | SHI61527.1 | SAMN04488513_101789 | SAMN04488513_101796 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | Acyl carrier protein. | 0.937 |
SHI61285.1 | SHI61642.1 | SAMN04488513_101789 | SAMN04488513_101799 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.953 |
SHI61285.1 | SHI61914.1 | SAMN04488513_101789 | SAMN04488513_101806 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain. | 0.974 |
SHI61285.1 | SHI61954.1 | SAMN04488513_101789 | SAMN04488513_101807 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 0.900 |
SHI61285.1 | SHI62107.1 | SAMN04488513_101789 | SAMN04488513_101811 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.922 |
SHI61285.1 | SHI62145.1 | SAMN04488513_101789 | SAMN04488513_101812 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.975 |
SHI61285.1 | SHJ37693.1 | SAMN04488513_101789 | SAMN04488513_104112 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | Amino acid adenylation domain-containing protein. | 0.780 |
SHI61391.1 | SHI61285.1 | SAMN04488513_101792 | SAMN04488513_101789 | Outer membrane lipoprotein carrier protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.912 |
SHI61391.1 | SHI61460.1 | SAMN04488513_101792 | SAMN04488513_101794 | Outer membrane lipoprotein carrier protein. | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.953 |
SHI61391.1 | SHI61493.1 | SAMN04488513_101792 | SAMN04488513_101795 | Outer membrane lipoprotein carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.929 |
SHI61391.1 | SHI61527.1 | SAMN04488513_101792 | SAMN04488513_101796 | Outer membrane lipoprotein carrier protein. | Acyl carrier protein. | 0.927 |
SHI61391.1 | SHI61642.1 | SAMN04488513_101792 | SAMN04488513_101799 | Outer membrane lipoprotein carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.889 |
SHI61391.1 | SHI61914.1 | SAMN04488513_101792 | SAMN04488513_101806 | Outer membrane lipoprotein carrier protein. | Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain. | 0.858 |
SHI61391.1 | SHI61954.1 | SAMN04488513_101792 | SAMN04488513_101807 | Outer membrane lipoprotein carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 0.810 |
SHI61391.1 | SHI62107.1 | SAMN04488513_101792 | SAMN04488513_101811 | Outer membrane lipoprotein carrier protein. | 3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.755 |
SHI61391.1 | SHI62145.1 | SAMN04488513_101792 | SAMN04488513_101812 | Outer membrane lipoprotein carrier protein. | 3-oxoacyl-[acyl-carrier protein] reductase. | 0.761 |
SHI61460.1 | SHI61285.1 | SAMN04488513_101794 | SAMN04488513_101789 | 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase. | 0.969 |
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