STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI36797.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
SHJ00103.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 0.967
SHK00185.1
Glutamate synthase (NADH) large subunit.
   
 
 0.899
SHJ00414.1
Nitrite reductase (NADH) large subunit; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.876
SHJ73217.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.865
SHJ58732.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 
 0.838
SHI50573.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.803
SHJ59223.1
Allosteric NADP-dependent malic enzyme.
    
  0.774
SHI38916.1
Protein of unknown function.
  
     0.770
SHJ67421.1
Hypothetical protein.
  
     0.762
SHJ50292.1
Hypothetical protein.
  
     0.757
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.