STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI37107.1Protein of unknown function. (513 aa)    
Predicted Functional Partners:
SHI37134.1
Nicotinamide-nucleotide adenylyltransferase, NadR type.
      0.981
SHJ85134.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
     
 0.814
SHI37167.1
Nicotinamide mononucleotide transporter.
     
 0.810
SHI37226.1
4'-phosphopantetheinyl transferase superfamily protein; Belongs to the P-Pant transferase superfamily.
       0.803
SHI37195.1
Hypothetical protein.
       0.773
SHI53804.1
Protein of unknown function.
 
     0.685
cobB
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
   
 
  0.619
SHK09109.1
Hypothetical protein.
   
 
  0.619
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.597
SHJ21723.1
Outer membrane protein transport protein (OMPP1/FadL/TodX).
  
     0.561
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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