STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI68566.1Penicillin-binding protein 2. (622 aa)    
Predicted Functional Partners:
SHI68533.1
Rod shape determining protein RodA; Belongs to the SEDS family.
 0.990
SHI68632.1
Rod shape-determining protein MreC.
 
 
 0.941
SHI68668.1
Rod shape-determining protein MreB.
 
 
 0.938
SHI51868.1
Penicillin-binding protein 1A.
 
 
 0.919
SHJ48509.1
Cell division protein FtsW; Belongs to the SEDS family.
 0.907
SHJ48389.1
Cell division protein FtsI (penicillin-binding protein 3).
  
  
 
0.897
SHI99299.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
     
 0.853
SHJ48600.1
Cell division protein FtsQ.
 
 
 0.845
SHJ28031.1
Muramoyltetrapeptide carboxypeptidase.
     
 0.839
SHJ85675.1
Penicillin-binding protein 1A.
  
 
 0.836
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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