STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI83133.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (190 aa)    
Predicted Functional Partners:
SHJ73217.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.879
SHK00185.1
Glutamate synthase (NADH) large subunit.
    
 0.862
SHJ73249.1
Signal transduction histidine kinase.
   
 0.765
SHI83022.1
Major royal jelly protein.
 
     0.753
SHI82884.1
Luciferase-type oxidoreductase, BA3436 family.
 
     0.718
SHI82992.1
Putative cyclase.
 
    0.692
SHI43674.1
Small GTP-binding protein domain-containing protein.
  
 
  0.630
SHJ06866.1
Adenylate cyclase.
  
 
  0.519
SHI83057.1
Mannose-6-phosphate isomerase, cupin superfamily.
       0.506
SHJ59223.1
Allosteric NADP-dependent malic enzyme.
     
 0.503
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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