STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI92482.1Predicted dehydrogenase. (488 aa)    
Predicted Functional Partners:
SHI55757.1
Protein of unknown function.
  
     0.749
SHJ80490.1
Protein of unknown function.
  
     0.732
SHI39750.1
Protein of unknown function.
  
     0.713
SHJ23297.1
Protein of unknown function.
  
     0.665
SHJ57314.1
Protein of unknown function.
  
     0.652
SHJ56808.1
Protein of unknown function.
  
     0.622
SHJ00921.1
Sugar phosphate isomerase/epimerase.
  
 
  0.605
SHI46168.1
Predicted dehydrogenase.
  
     0.596
SHI92446.1
Protein of unknown function.
 
     0.572
SHI47688.1
Protein of unknown function.
  
     0.553
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.