Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI52143.1 | SHI55267.1 | SAMN04488513_101534 | SAMN04488513_101619 | Hypothetical protein. | C1q domain-containing protein. | 0.599 |
SHI52143.1 | SHI95027.1 | SAMN04488513_101534 | SAMN04488513_102365 | Hypothetical protein. | Imidazolonepropionase. | 0.547 |
SHI52143.1 | SHJ26565.1 | SAMN04488513_101534 | SAMN04488513_103215 | Hypothetical protein. | C-terminal domain of CHU protein family protein. | 0.533 |
SHI52143.1 | SHJ74799.1 | SAMN04488513_101534 | SAMN04488513_10854 | Hypothetical protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.501 |
SHI55267.1 | SHI52143.1 | SAMN04488513_101619 | SAMN04488513_101534 | C1q domain-containing protein. | Hypothetical protein. | 0.599 |
SHI55267.1 | SHI95027.1 | SAMN04488513_101619 | SAMN04488513_102365 | C1q domain-containing protein. | Imidazolonepropionase. | 0.581 |
SHI55267.1 | SHJ26565.1 | SAMN04488513_101619 | SAMN04488513_103215 | C1q domain-containing protein. | C-terminal domain of CHU protein family protein. | 0.771 |
SHI55267.1 | SHJ74799.1 | SAMN04488513_101619 | SAMN04488513_10854 | C1q domain-containing protein. | Gliding motility-associated C-terminal domain-containing protein. | 0.773 |
SHI55267.1 | SHJ95066.1 | SAMN04488513_101619 | SAMN04488513_11360 | C1q domain-containing protein. | Hypothetical protein. | 0.700 |
SHI55267.1 | SHJ99075.1 | SAMN04488513_101619 | SAMN04488513_11543 | C1q domain-containing protein. | Acetolactate decarboxylase. | 0.750 |
SHI62225.1 | SHI69340.1 | SAMN04488513_101814 | SAMN04488513_1011012 | Histidine ammonia-lyase. | Arginase family enzyme; Belongs to the arginase family. | 0.748 |
SHI62225.1 | SHI95027.1 | SAMN04488513_101814 | SAMN04488513_102365 | Histidine ammonia-lyase. | Imidazolonepropionase. | 0.703 |
SHI69340.1 | SHI62225.1 | SAMN04488513_1011012 | SAMN04488513_101814 | Arginase family enzyme; Belongs to the arginase family. | Histidine ammonia-lyase. | 0.748 |
SHI69340.1 | SHI95027.1 | SAMN04488513_1011012 | SAMN04488513_102365 | Arginase family enzyme; Belongs to the arginase family. | Imidazolonepropionase. | 0.491 |
SHI83777.1 | SHI95027.1 | SAMN04488513_10231 | SAMN04488513_102365 | Iron complex outermembrane recepter protein. | Imidazolonepropionase. | 0.561 |
SHI95027.1 | SHI52143.1 | SAMN04488513_102365 | SAMN04488513_101534 | Imidazolonepropionase. | Hypothetical protein. | 0.547 |
SHI95027.1 | SHI55267.1 | SAMN04488513_102365 | SAMN04488513_101619 | Imidazolonepropionase. | C1q domain-containing protein. | 0.581 |
SHI95027.1 | SHI62225.1 | SAMN04488513_102365 | SAMN04488513_101814 | Imidazolonepropionase. | Histidine ammonia-lyase. | 0.703 |
SHI95027.1 | SHI69340.1 | SAMN04488513_102365 | SAMN04488513_1011012 | Imidazolonepropionase. | Arginase family enzyme; Belongs to the arginase family. | 0.491 |
SHI95027.1 | SHI83777.1 | SAMN04488513_102365 | SAMN04488513_10231 | Imidazolonepropionase. | Iron complex outermembrane recepter protein. | 0.561 |
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