Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI58254.1 | SHI58290.1 | SAMN04488513_101707 | SAMN04488513_101708 | Tagaturonate reductase. | Altronate hydrolase. | 0.987 |
SHI58254.1 | SHI91934.1 | SAMN04488513_101707 | SAMN04488513_102273 | Tagaturonate reductase. | 2-dehydro-3-deoxygluconokinase. | 0.414 |
SHI58254.1 | SHJ08068.1 | SAMN04488513_101707 | SAMN04488513_102778 | Tagaturonate reductase. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.722 |
SHI58254.1 | SHJ88081.1 | SAMN04488513_101707 | SAMN04488513_11144 | Tagaturonate reductase. | 2-dehydro-3-deoxygluconokinase. | 0.416 |
SHI58254.1 | uxaC | SAMN04488513_101707 | SAMN04488513_101308 | Tagaturonate reductase. | D-glucuronate isomerase. | 0.934 |
SHI58290.1 | SHI58254.1 | SAMN04488513_101708 | SAMN04488513_101707 | Altronate hydrolase. | Tagaturonate reductase. | 0.987 |
SHI58290.1 | SHI91934.1 | SAMN04488513_101708 | SAMN04488513_102273 | Altronate hydrolase. | 2-dehydro-3-deoxygluconokinase. | 0.799 |
SHI58290.1 | SHJ08068.1 | SAMN04488513_101708 | SAMN04488513_102778 | Altronate hydrolase. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.728 |
SHI58290.1 | SHJ10310.1 | SAMN04488513_101708 | SAMN04488513_102846 | Altronate hydrolase. | Tagaturonate reductase. | 0.945 |
SHI58290.1 | SHJ88081.1 | SAMN04488513_101708 | SAMN04488513_11144 | Altronate hydrolase. | 2-dehydro-3-deoxygluconokinase. | 0.799 |
SHI58290.1 | uxaC | SAMN04488513_101708 | SAMN04488513_101308 | Altronate hydrolase. | D-glucuronate isomerase. | 0.883 |
SHI91934.1 | SHI58254.1 | SAMN04488513_102273 | SAMN04488513_101707 | 2-dehydro-3-deoxygluconokinase. | Tagaturonate reductase. | 0.414 |
SHI91934.1 | SHI58290.1 | SAMN04488513_102273 | SAMN04488513_101708 | 2-dehydro-3-deoxygluconokinase. | Altronate hydrolase. | 0.799 |
SHI91934.1 | SHJ08068.1 | SAMN04488513_102273 | SAMN04488513_102778 | 2-dehydro-3-deoxygluconokinase. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.681 |
SHI91934.1 | SHJ10310.1 | SAMN04488513_102273 | SAMN04488513_102846 | 2-dehydro-3-deoxygluconokinase. | Tagaturonate reductase. | 0.434 |
SHI91934.1 | uxaC | SAMN04488513_102273 | SAMN04488513_101308 | 2-dehydro-3-deoxygluconokinase. | D-glucuronate isomerase. | 0.590 |
SHJ07967.1 | SHJ07997.1 | SAMN04488513_102774 | SAMN04488513_102775 | Alpha-1,2-mannosidase, putative. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.773 |
SHJ07967.1 | SHJ08020.1 | SAMN04488513_102774 | SAMN04488513_102776 | Alpha-1,2-mannosidase, putative. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.727 |
SHJ07967.1 | SHJ08044.1 | SAMN04488513_102774 | SAMN04488513_102777 | Alpha-1,2-mannosidase, putative. | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.727 |
SHJ07967.1 | SHJ08068.1 | SAMN04488513_102774 | SAMN04488513_102778 | Alpha-1,2-mannosidase, putative. | Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.693 |
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