STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ08139.1Alpha-mannosidase. (901 aa)    
Predicted Functional Partners:
SHJ08116.1
Glycosyl hydrolase family 76.
       0.727
SHJ08550.1
SusD family protein.
 
     0.720
SHJ08331.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.708
SHJ08164.1
Glycosyl hydrolases family 38 N-terminal domain-containing protein.
 
    
0.688
SHJ08068.1
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
     0.619
SHJ23267.1
DNA phosphorothioation-dependent restriction protein DptG.
  
     0.611
SHJ08579.1
TonB-linked outer membrane protein, SusC/RagA family.
 
     0.586
SHJ29075.1
Hypothetical protein.
  
     0.562
SHJ08092.1
Hypothetical protein.
  
    0.536
SHJ08452.1
Demethylmenaquinone methyltransferase.
 
     0.524
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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