Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI45867.1 | SHJ08813.1 | SAMN04488513_101349 | SAMN04488513_102803 | 2-dehydro-3-deoxygalactonokinase. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.517 |
SHI45867.1 | SHJ09052.1 | SAMN04488513_101349 | SAMN04488513_102810 | 2-dehydro-3-deoxygalactonokinase. | Galactonate dehydratase. | 0.682 |
SHI47604.1 | SHJ09018.1 | SAMN04488513_101405 | SAMN04488513_102809 | Sugar lactone lactonase YvrE. | Transcriptional regulator, IclR family. | 0.902 |
SHI47604.1 | SHJ09052.1 | SAMN04488513_101405 | SAMN04488513_102810 | Sugar lactone lactonase YvrE. | Galactonate dehydratase. | 0.424 |
SHJ08813.1 | SHI45867.1 | SAMN04488513_102803 | SAMN04488513_101349 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2-dehydro-3-deoxygalactonokinase. | 0.517 |
SHJ08813.1 | SHJ09052.1 | SAMN04488513_102803 | SAMN04488513_102810 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Galactonate dehydratase. | 0.455 |
SHJ08813.1 | SHJ11281.1 | SAMN04488513_102803 | SAMN04488513_102872 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2-dehydro-3-deoxygalactonokinase. | 0.523 |
SHJ08813.1 | SHJ37693.1 | SAMN04488513_102803 | SAMN04488513_104112 | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Amino acid adenylation domain-containing protein. | 0.575 |
SHJ09018.1 | SHI47604.1 | SAMN04488513_102809 | SAMN04488513_101405 | Transcriptional regulator, IclR family. | Sugar lactone lactonase YvrE. | 0.902 |
SHJ09018.1 | SHJ09052.1 | SAMN04488513_102809 | SAMN04488513_102810 | Transcriptional regulator, IclR family. | Galactonate dehydratase. | 0.625 |
SHJ09018.1 | SHJ09094.1 | SAMN04488513_102809 | SAMN04488513_102811 | Transcriptional regulator, IclR family. | MFS transporter, ACS family, D-galactonate transporter. | 0.520 |
SHJ09052.1 | SHI45867.1 | SAMN04488513_102810 | SAMN04488513_101349 | Galactonate dehydratase. | 2-dehydro-3-deoxygalactonokinase. | 0.682 |
SHJ09052.1 | SHI47604.1 | SAMN04488513_102810 | SAMN04488513_101405 | Galactonate dehydratase. | Sugar lactone lactonase YvrE. | 0.424 |
SHJ09052.1 | SHJ08813.1 | SAMN04488513_102810 | SAMN04488513_102803 | Galactonate dehydratase. | L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.455 |
SHJ09052.1 | SHJ09018.1 | SAMN04488513_102810 | SAMN04488513_102809 | Galactonate dehydratase. | Transcriptional regulator, IclR family. | 0.625 |
SHJ09052.1 | SHJ09094.1 | SAMN04488513_102810 | SAMN04488513_102811 | Galactonate dehydratase. | MFS transporter, ACS family, D-galactonate transporter. | 0.610 |
SHJ09052.1 | SHJ11281.1 | SAMN04488513_102810 | SAMN04488513_102872 | Galactonate dehydratase. | 2-dehydro-3-deoxygalactonokinase. | 0.675 |
SHJ09052.1 | SHJ37693.1 | SAMN04488513_102810 | SAMN04488513_104112 | Galactonate dehydratase. | Amino acid adenylation domain-containing protein. | 0.575 |
SHJ09052.1 | SHJ46801.1 | SAMN04488513_102810 | SAMN04488513_10551 | Galactonate dehydratase. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.475 |
SHJ09094.1 | SHJ09018.1 | SAMN04488513_102811 | SAMN04488513_102809 | MFS transporter, ACS family, D-galactonate transporter. | Transcriptional regulator, IclR family. | 0.520 |
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