Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI41609.1 | SHJ10384.1 | SAMN04488513_101229 | SAMN04488513_102848 | Fructokinase. | L-fucose dehydrogenase. | 0.667 |
SHI50573.1 | SHI91719.1 | SAMN04488513_101490 | SAMN04488513_102267 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | L-fuconolactonase. | 0.836 |
SHI50573.1 | SHI97939.1 | SAMN04488513_101490 | SAMN04488513_102457 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 3-hydroxyacyl-CoA dehydrogenase. | 0.853 |
SHI50573.1 | SHJ10384.1 | SAMN04488513_101490 | SAMN04488513_102848 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | L-fucose dehydrogenase. | 0.686 |
SHI50573.1 | SHJ37693.1 | SAMN04488513_101490 | SAMN04488513_104112 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Amino acid adenylation domain-containing protein. | 0.934 |
SHI50573.1 | SHJ73217.1 | SAMN04488513_101490 | SAMN04488513_1083 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.681 |
SHI50573.1 | SHK00185.1 | SAMN04488513_101490 | SAMN04488513_1169 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glutamate synthase (NADH) large subunit. | 0.915 |
SHI91719.1 | SHI50573.1 | SAMN04488513_102267 | SAMN04488513_101490 | L-fuconolactonase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.836 |
SHI91719.1 | SHI91754.1 | SAMN04488513_102267 | SAMN04488513_102268 | L-fuconolactonase. | L-rhamnose mutarotase. | 0.912 |
SHI91719.1 | SHJ10384.1 | SAMN04488513_102267 | SAMN04488513_102848 | L-fuconolactonase. | L-fucose dehydrogenase. | 0.935 |
SHI91719.1 | SHJ10423.1 | SAMN04488513_102267 | SAMN04488513_102849 | L-fuconolactonase. | MFS transporter, FHS family, L-fucose permease. | 0.455 |
SHI91719.1 | SHJ10465.1 | SAMN04488513_102267 | SAMN04488513_102850 | L-fuconolactonase. | L-rhamnose mutarotase. | 0.782 |
SHI91754.1 | SHI91719.1 | SAMN04488513_102268 | SAMN04488513_102267 | L-rhamnose mutarotase. | L-fuconolactonase. | 0.912 |
SHI91754.1 | SHJ10384.1 | SAMN04488513_102268 | SAMN04488513_102848 | L-rhamnose mutarotase. | L-fucose dehydrogenase. | 0.746 |
SHI91754.1 | SHJ10423.1 | SAMN04488513_102268 | SAMN04488513_102849 | L-rhamnose mutarotase. | MFS transporter, FHS family, L-fucose permease. | 0.616 |
SHI97939.1 | SHI50573.1 | SAMN04488513_102457 | SAMN04488513_101490 | 3-hydroxyacyl-CoA dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.853 |
SHI97939.1 | SHJ10384.1 | SAMN04488513_102457 | SAMN04488513_102848 | 3-hydroxyacyl-CoA dehydrogenase. | L-fucose dehydrogenase. | 0.800 |
SHI97939.1 | SHJ37693.1 | SAMN04488513_102457 | SAMN04488513_104112 | 3-hydroxyacyl-CoA dehydrogenase. | Amino acid adenylation domain-containing protein. | 0.991 |
SHI97939.1 | SHJ73217.1 | SAMN04488513_102457 | SAMN04488513_1083 | 3-hydroxyacyl-CoA dehydrogenase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.951 |
SHI97939.1 | SHK00185.1 | SAMN04488513_102457 | SAMN04488513_1169 | 3-hydroxyacyl-CoA dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.630 |
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