STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ24603.1Hypothetical protein. (62 aa)    
Predicted Functional Partners:
SHJ51353.1
Acyl-CoA-binding protein.
  
     0.747
SHJ41625.1
Hypothetical protein.
  
     0.729
SHI41645.1
Putative DNA-binding domain-containing protein.
  
     0.728
SHJ85797.1
Hypothetical protein.
  
     0.724
SHJ59573.1
Hypothetical protein.
  
     0.719
SHJ57604.1
Aspartyl protease.
  
     0.712
SHJ47091.1
Hypothetical protein.
  
     0.692
SHJ47127.1
Hypothetical protein.
  
     0.691
SHJ88784.1
Hypothetical protein.
  
     0.646
SHJ20841.1
Hypothetical protein.
  
     0.642
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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