STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ26383.1Gliding motility-associated C-terminal domain-containing protein. (4106 aa)    
Predicted Functional Partners:
SHJ90161.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.760
SHJ26588.1
Conserved repeat domain-containing protein.
  
     0.749
SHI48308.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.709
SHI48368.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.708
SHJ95351.1
Subtilase family protein.
  
 
  0.707
SHJ60219.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
  
     0.705
SHI38615.1
Fibronectin type III domain-containing protein.
  
     0.694
SHI60692.1
Hypothetical protein.
  
     0.649
SHI38587.1
Hypothetical protein.
  
     0.631
SHJ51170.1
Aspartyl protease.
   
  0.620
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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