STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ27810.1cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. (187 aa)    
Predicted Functional Partners:
SHJ27834.1
Hypothetical protein.
       0.590
SHJ27854.1
Hypothetical protein.
  
    0.585
SHI61996.1
Flavodoxin.
     
 0.557
SHJ27876.1
ATP-binding cassette, subfamily F, uup.
       0.518
SHJ60487.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
 
   
 0.516
SHJ27789.1
Protein of unknown function.
       0.511
SHJ27895.1
Protein of unknown function.
     
 0.507
SHI96698.1
Iron complex transport system ATP-binding protein.
  
 
  0.497
SHJ60517.1
methylmalonyl-CoA mutase.
 
     0.442
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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