STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ39046.1Beta-glucosidase. (970 aa)    
Predicted Functional Partners:
SHJ80121.1
Uncharacterized conserved protein YbbC, DUF1343 family.
 
 0.949
SHJ39913.1
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
 
  
 0.943
SHJ39198.1
N-acetylmuramoyl-L-alanine amidase.
 
  
 0.936
SHJ39886.1
Beta-glucosidase.
 
 
 
0.888
SHJ94287.1
Flagellum-specific peptidoglycan hydrolase FlgJ.
    
 0.840
SHI87811.1
N-acetyl-anhydromuramyl-L-alanine amidase AmpD.
   
 0.836
SHI99299.1
D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).
    
 0.788
SHJ28031.1
Muramoyltetrapeptide carboxypeptidase.
    
 0.779
SHJ84558.1
LysM repeat-containing protein.
 
  
 0.775
SHI49126.1
Membrane-bound lytic murein transglycosylase D.
 
  
 0.762
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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