STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ45880.1Por secretion system C-terminal sorting domain-containing protein. (913 aa)    
Predicted Functional Partners:
SHJ45844.1
Hypothetical protein.
 
     0.904
SHJ95351.1
Subtilase family protein.
  
 
  0.815
SHJ05501.1
Glycosyl hydrolases family 16.
  
     0.768
SHJ09964.1
Glycosyl hydrolases family 16.
  
     0.748
SHJ85969.1
Hypothetical protein.
  
     0.686
SHJ37047.1
Hypothetical protein.
  
  0.669
SHI55267.1
C1q domain-containing protein.
  
     0.668
SHJ09221.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.656
SHJ04604.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
  
     0.652
SHJ21432.1
PKD domain-containing protein.
 
  
  0.633
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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