STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ60729.1Glycosyltransferase involved in cell wall bisynthesis. (402 aa)    
Predicted Functional Partners:
SHJ60599.1
Protein involved in gliding motility EpsB.
 
  
 0.826
SHI55886.1
Cysteine-rich secretory protein family protein.
  
     0.742
SHJ60219.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
  
     0.711
SHJ61004.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.710
SHI48335.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.709
SHI34566.1
Lysophospholipase L1.
  
     0.696
SHJ50257.1
Hypothetical protein.
  
     0.695
SHJ37693.1
Amino acid adenylation domain-containing protein.
 
 
 0.688
SHJ79439.1
Trypsin-like peptidase domain-containing protein; Belongs to the peptidase S1B family.
  
     0.687
SHJ60760.1
Hypothetical protein.
 
     0.677
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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