STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ61376.1Glycosyltransferase, GT2 family. (274 aa)    
Predicted Functional Partners:
SHJ60547.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
 
 0.934
SHJ61340.1
Hexapeptide repeat of succinyl-transferase.
 
   
 0.833
SHJ61213.1
Na+-driven multidrug efflux pump.
 
     0.803
SHJ61409.1
Hypothetical protein.
       0.775
SHJ61279.1
Acetyltransferase (isoleucine patch superfamily).
 
   
 0.760
SHJ61309.1
Hypothetical protein.
       0.759
SHJ61514.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.699
SHJ61442.1
Glycosyl transferases group 1.
 
    0.670
SHJ61183.1
N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.
 
  
 0.617
SHJ61247.1
Hypothetical protein.
       0.615
Your Current Organism:
Pseudozobellia thermophila
NCBI taxonomy Id: 192903
Other names: Costertonia sp. KCTC 22017, DSM 19858, JCM 11733, KCTC 22016, KMM 3531, P. thermophila, Pseudozobellia thermophila Nedashkovskaya et al. 2009, Zobellia sp. KMM 3531
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